CSI Logo
Dedicated to the long-standing tradition of Systems Biology
ArrowSearch ArrowUW Directories
ArrowCSIArrowCSI Teams & ProjectsArrowModeling & SimulationArrowBioglyphics & BALSA
Top Curve
Side Curve
What is CSI?

What's Happening at CSI?

Contact CSI

White Dot
Cell Systems Biology

Education

Modeling & Simulation

Launched: Labscape

White Dot
Systems Support

CSI Collaborators

Bioglyphics & BALSA


Biological Abstraction Layer for Simulation Analysis
 
BALSA is a prototype cell systems modeling environment written in Java.

BALSA features:
  • a Bioglyphics software editor
  • a Bioglyphics to SBML compiler
  • automated cartoon generation
  • seamless integration with SigTran for SBML models

For more information on BALSA, please contact:

Paul Loriaux
ploriaux@washington.edu


To view a representation of the canonical Wnt/beta-catenin signaling pathway that plays a key role in development and disease, and that is featured on the AAAS Signal Transduction Knowledge Environment, click here.

To view the compiled SBML representation of this pathway, click here.

To see how Bioglyphics can be used to facilitate the creation of complex, multi-state and multi-contextual molecular systems, see the 10 statement degredation complex formation module, and its compiled SBML form, which consists of 167 distinct reactions.

RELATED PRESENTATIONS

Bottom UW/CSI Logo Copyright 2002, CSI
Department to Bioengineering University of Washington